ImportError                               Traceback (most recent call last)
File ~/analysis/.venv/lib/python3.13/site-packages/numpy/_core/__init__.py:22
     21 try:
---> 22     from . import multiarray
     23 except ImportError as exc:

File ~/analysis/.venv/lib/python3.13/site-packages/numpy/_core/multiarray.py:11
      9 import functools
---> 11 from . import _multiarray_umath, overrides
     12 from ._multiarray_umath import *  # noqa: F403

ImportError: libiomp5.so: cannot open shared object file: No such file or directory

The above exception was the direct cause of the following exception:

ImportError                               Traceback (most recent call last)
Cell In[2], line 6
      2 from __future__ import annotations
      4 import os
----> 6 import h5py as h5
      7 import matplotlib.patheffects as mpe
      8 import matplotlib.pyplot as plt

File ~/analysis/.venv/lib/python3.13/site-packages/h5py/__init__.py:33
     30     else:
     31         raise
---> 33 from . import version
     35 if version.hdf5_version_tuple != version.hdf5_built_version_tuple:
     36     _warn(("h5py is running against HDF5 {0} when it was built against {1}, "
     37            "this may cause problems").format(
     38             '{0}.{1}.{2}'.format(*version.hdf5_version_tuple),
     39             '{0}.{1}.{2}'.format(*version.hdf5_built_version_tuple)
     40     ))

File ~/analysis/.venv/lib/python3.13/site-packages/h5py/version.py:17
     15 from . import h5 as _h5
     16 import sys
---> 17 import numpy
     19 # All should be integers, except pre, as validating versions is more than is
     20 # needed for our use case
     21 _H5PY_VERSION_CLS = namedtuple("_H5PY_VERSION_CLS",
     22                                "major minor bugfix pre post dev")

File ~/analysis/.venv/lib/python3.13/site-packages/numpy/__init__.py:112
    109 from . import _distributor_init
    111 try:
--> 112     from numpy.__config__ import show_config
    113 except ImportError as e:
    114     if isinstance(e, ModuleNotFoundError) and e.name == "numpy.__config__":
    115         # The __config__ module itself was not found, so add this info:

File ~/analysis/.venv/lib/python3.13/site-packages/numpy/__config__.py:4
      1 # This file is generated by numpy's build process
      2 # It contains system_info results at the time of building this package.
      3 from enum import Enum
----> 4 from numpy._core._multiarray_umath import (
      5     __cpu_features__,
      6     __cpu_baseline__,
      7     __cpu_dispatch__,
      8 )
     10 __all__ = ["show_config"]
     11 _built_with_meson = True

File ~/analysis/.venv/lib/python3.13/site-packages/numpy/_core/__init__.py:83
     56     major, minor, *_ = sys.version_info
     57     msg = f"""
     58 
     59 IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
   (...)
     80 Original error was: {exc}
     81 """
---> 83     raise ImportError(msg) from exc
     84 finally:
     85     for envkey in env_added:

ImportError: 

IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!

Importing the numpy C-extensions failed. This error can happen for
many reasons, often due to issues with your setup or how NumPy was
installed.

We have compiled some common reasons and troubleshooting tips at:

    https://numpy.org/devdocs/user/troubleshooting-importerror.html

Please note and check the following:

  * The Python version is: Python 3.13 from "/u/bipra/analysis/.venv/bin/python"
  * The NumPy version is: "2.4.0.dev0+git20250715.c8ec872"

and make sure that they are the versions you expect.

Please carefully study the information and documentation linked above.
This is unlikely to be a NumPy issue but will be caused by a bad install
or environment on your machine.

Original error was: libiomp5.so: cannot open shared object file: No such file or directory